277 (CAS1) squalene_cyclas
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
277 chr_2 (CAS1) squalene_cyclas 1649997 1654215 + squalene_cyclas
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0177
hypothetical protein
0.908
NA
0.904
P4Hc
0.8984
PRK05279
0.89
Smc
0.8862
SEC14
0.8857
(bd789) ABC_ATPase superfamily
0.8826
TRX_reduct
0.8793
hypothetical protein
0.8718
hypothetical protein
0.8712
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6... cl08267 759.425 0 582 - 1247 specific 239222
ISOPREN_C2_like superfamily This group contains class II terpene cyclases, protein prenyltransferases beta subunit, two broadly... - 759.425 0 582 - 1247 superfamily 263556
squalene_cyclas squalene/oxidosqualene cyclases; This family of enzymes catalyzes the cyclization of the... - 636.407 0 581 - 1247 multi-dom 233578
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_21046 PHATRDRAFT_21046 209964 303195 458646 Cre01.g011100.t1.2 AT2G07050.1 Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003824 GO:0008152 GO:0016829 GO:0016871 -

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

lyase activity

Details: 
Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
GO Category: 
MF

cycloartenol synthase activity

Details: 
Catalysis of the reaction: (S)-2,3-epoxysqualene = cycloartenol.
GO Category: 
MF
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