27986 LMBR1 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
27986 chr_4 LMBR1 superfamily 1568386 1570205 + LMBR1 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442337 Thaps27986.2, Thaps27986.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0206

Most Highly Correlated Transcripts

14924

Lung_7-TM_R superfamily
0.9401

264556

FBPase
0.9383

261126

DadA
0.9348

264492

Peptidase_C1A
0.9325

16295

FBPase
0.9212

4353

O-FucT_like
0.9185

13448

Sec1
0.9101

1819

hypothetical protein
0.9098

261400

NA
0.9076

7564

DUF547
0.9067

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
LMBR1 superfamily LMBR1-like membrane protein; Members of this family are integral membrane proteins that are around... - 86.3463 1.71E-18 14 - 501 superfamily 252804

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_30810 PHATRDRAFT_30810 182579 309265 Not available Cre01.g023400.t1.1 AT3G08930.1 522442

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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