29861 gltB
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
29861 chr_13 gltB 602779 607998 - gltB
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0416
Normalized Mean Residue
Thaps_bicluster_0150
0.38
(acnB) PLN00094
0.8442
hypothetical protein
0.8386
(bd877) NA
0.8372
(bd409) Snf7 superfamily
0.8312
hypothetical protein
0.8132
MgtA
0.8068
hypothetical protein
0.8064
(bd1840) NA
0.8054
hypothetical protein
0.8051
hypothetical protein
0.8047
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GltS Glutamine amidotransferases class-II (Gn-AT), glutamate synthase (GltS)-type. GltS is a homodimer... cl00319 631.483 0 11 - 431 specific 238365
Gn_AT_II superfamily Glutamine amidotransferases class-II (GATase). The glutaminase domain catalyzes an amide nitrogen... - 631.483 0 11 - 431 superfamily 260351
GltS_FMN Glutamate synthase (GltS) FMN-binding domain. GltS is a complex iron-sulfur flavoprotein that... cl17186 495.138 3.53E-161 831 - 1196 specific 239202
TIM_phosphate_binding superfamily TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an... - 495.138 3.53E-161 831 - 1196 superfamily 266538
gltB_C gltb_C. This domain is found at the C-terminus of the large subunit (gltB) of glutamate synthase (... cl00239 438.114 4.00E-142 1251 - 1502 specific 238482
GXGXG superfamily GXGXG domain. This domain of unknown function is found at the C-terminus of the large subunit (gltB... - 438.114 4.00E-142 1251 - 1502 superfamily 260291
Glu_syn_central superfamily Glutamate synthase central domain; The central domain of glutamate synthase connects the amino... - 418.489 2.94E-134 464 - 765 superfamily 252865
Glu_syn_central superfamily Glutamate synthase central domain; The central domain of glutamate synthase connects the amino... - 418.489 2.94E-134 464 - 765 superfamily 252865
gltB glutamate synthase subunit alpha; Provisional - 1618.02 0 1 - 1501 multi-dom 236968
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
31783 PHATRDRAFT_51214 PHATRDRAFT_51214 167114 69793 467437 Not available AT2G41220.1 352697
KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110
GO:0008152 GO:0016491 GO:0006537 GO:0015930 GO:0006807 GO:0004355 GO:0009342 GO:0045181 -

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

glutamate biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of glutamate, the anion of 2-aminopentanedioic acid.
GO Category: 
BP

glutamate synthase activity

Details: 
Catalysis of the formation of L-glutamine and 2-oxoglutarate from L-glutamate, using NADH, NADPH or ferredoxin as hydrogen acceptors.
GO Category: 
MF

nitrogen compound metabolic process

Details: 
The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen, including (but not limited to) nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium.
GO Category: 
BP

glutamate synthase (NADPH) activity

Details: 
Catalysis of the reaction: 2 L-glutamate + NADP(+) = 2-oxoglutarate + L-glutamine + H(+) + NADPH. This is a two-step reaction: (a) L-glutamate + NH3 = L-glutamine + H2O, (b) L-glutamate + NADP+ + H2O = NH3 + 2-oxoglutarate + NADPH + H+.
GO Category: 
MF

glutamate synthase complex (NADPH)

Details: 
A complex that possesses glutamate synthase (NADPH) activity.
GO Category: 
CC

glutamate synthase activity, NAD(P)H as acceptor

Details: 
Catalysis of the reaction: 2 L-glutamate + NAD(P)+ = L-glutamine + 2-oxoglutarate + NAD(P)H + H+.
GO Category: 
MF
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