32860 (EAR1) PLN02730
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
32860 chr_3 (EAR1) PLN02730 531390 532328 + PLN02730

Synonyms

NCBI ID Ensembl Genomes exon ID
7444050 Thaps32860.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0059

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0156
 0.33

Most Highly Correlated Transcripts

bd1306

(bd1306) NA
0.9648

bd1645

(bd1645) tpt
0.9472

bd1403

(bd1403) NA
0.9351

bd760

(bd760) ZnMc superfamily
0.9324

bd208

(bd208) DUF3529
0.9216

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9177

bd1820

(bd1820) Fasciclin
0.9159

bd1863

(bd1863) NA
0.9109

bd1342

(bd1342) psaL
0.9057

bd718

(bd718) PRK10387
0.905

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PLN02730 enoyl-[acyl-carrier-protein] reductase cl09931 532.813 0 3 - 312 specific 178331
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 532.813 0 3 - 312 superfamily 263925
FabI Enoyl-[acyl-carrier-protein] - 231.719 1.82E-74 8 - 304 multi-dom 223696

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
4026 PHATRDRAFT_10068 PHATRDRAFT_10068 273196 325369 462385 Cre06.g294950.t1.1 AT2G05990.2 313559

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0008152 GO:0016491 GO:0004318 GO:0016631 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0004318

enoyl-[acyl-carrier-protein] reductase (NADH) activity

Details: 
Catalysis of the reaction: acyl-[acyl-carrier protein] + NAD+ = trans-2,3-dehydroacyl-[acyl-carrier protein] + NADH + H+.
GO Category: 
MF

GO:0016631

enoyl-[acyl-carrier-protein] reductase activity

Details: 
Catalysis of the reaction: acyl-[acyl-carrier protein] + NAD(P)+ = trans-2,3-dehydroacyl-[acyl-carrier protein] + NAD(P)H + H+.
GO Category: 
MF

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