33169 Mpv17_PMP22
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
33169 chr_3 Mpv17_PMP22 1030027 1030839 + Mpv17_PMP22

Synonyms

NCBI ID Ensembl Genomes exon ID
7451665 Thaps33169.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0014

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0127
 0.38

Most Highly Correlated Transcripts

28125

PLN00203
0.8614

270213

(Hlip2) high light induced protein 2
0.859

270308

hypothetical protein
0.8323

37288

PLN02487
0.827

38221

bPH_2
0.8265

10943

(DXR1) PLN02696
0.8259

574

PRK05444
0.8241

21348

hypothetical protein
0.823

5380

DUF1092 superfamily
0.822

3463

hypothetical protein
0.8193

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Mpv17_PMP22 superfamily Mpv17 / PMP22 family; The 22-kDa peroxisomal membrane protein (PMP22) is a major component of... - 84.9747 3.11E-21 200 - 267 superfamily 252388
Mpv17_PMP22 superfamily Mpv17 / PMP22 family; The 22-kDa peroxisomal membrane protein (PMP22) is a major component of... - 84.9747 3.11E-21 200 - 267 superfamily 252388

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_31436 PHATRDRAFT_31436 196530 190409 103689 Cre06.g278800.t1.2 AT4G14305.1 Not available

KEGG

KEGG description KEGG Pathway
Peroxisome map04146

GO Terms

GO:0016021 -

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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