34982 caca2
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
34982 chr_6 caca2 735751 737902 + caca2

Synonyms

NCBI ID Ensembl Genomes exon ID
7448608 Thaps34982.2, Thaps34982.1, Thaps34982.3, Thaps34982.4

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0126

Most Highly Correlated Transcripts

1463

hypothetical protein
0.899

25535

hypothetical protein
0.8848

21090

hypothetical protein
0.876

23473

Cupin_8 superfamily
0.8746

40200

TRX_reduct
0.8713

25338

hypothetical protein
0.8653

20714

PDI_a_family
0.8619

3500

hypothetical protein
0.858

24475

(RPT3) PTZ00454
0.8565

25678

hypothetical protein
0.8564

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Na_Ca_ex superfamily Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral membrane... - 63.0048 4.62E-12 102 - 250 superfamily 250805
Na_Ca_ex superfamily Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral membrane... - 63.0048 4.62E-12 102 - 250 superfamily 250805
Na_Ca_ex superfamily Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral membrane... - 63.0048 4.62E-12 102 - 250 superfamily 250805
Na_Ca_ex superfamily Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral membrane... - 63.0048 4.62E-12 102 - 250 superfamily 250805
caca2 calcium/proton exchanger; The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of the CaCA... - 238.458 8.52E-74 64 - 428 multi-dom 129926

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_2762 PHATRDRAFT_2762 192453 197199 Not available Not available AT1G55730.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016021 -

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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