35017 nt_trans superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
35017	chr_6	nt_trans superfamily	1047108	1049696	+	nt_trans superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445968	Thaps35017.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0164

Most Highly Correlated Transcripts

7299 hypothetical protein 0.9044	4027 hypothetical protein 0.8913	31132 MPP_Dbr1_N 0.8904	262127 NADB_Rossmann superfamily 0.8903	4338 hypothetical protein 0.8903	22946 hypothetical protein 0.8885
21655 hypothetical protein 0.8862	261261 ArfGap 0.8862	23952 hypothetical protein 0.886	262747 hypothetical protein 0.8851

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
nt_trans superfamily		nucleotidyl transferase superfamily; nt_trans (nucleotidyl transferase) This superfamily includes...	-	126.528	2.80E-33	381 - 529	superfamily	260139

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_8657	PHATRDRAFT_8657	202949	179419	214399	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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