35031 Evr1_Alr superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
35031	chr_6	Evr1_Alr superfamily	1172914	1173731	-	Evr1_Alr superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442384	Thaps35031.1, Thaps35031.2, Thaps35031.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0200

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0263	0.34	0.55 17

Most Highly Correlated Transcripts

bd1749 (bd1749) NA 0.8856	39149 PRK05218 0.8459	268062 PRK14293 0.8405	262630 dnaj-like protein 0.8319	29506 cpn10 0.8276	5105 hypothetical protein 0.8233
2378 hypothetical protein 0.8214	268059 hypothetical protein 0.8178	21965 PDI_a_ERp38 0.8161	10907 hypothetical protein 0.8157

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Evr1_Alr superfamily		Erv1 / Alr family; Biogenesis of Fe/S clusters involves a number of essential mitochondrial...	-	126.912	1.76E-36	50 - 183	superfamily	261180

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATR_13254	PHATR_13254	184712	307316	202750	Cre14.g633000.t1.2	AT1G49880.1	284799

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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