3611 MIT_CorA-like superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
3611	chr_3	MIT_CorA-like superfamily	1357146	1357989	-	MIT_CorA-like superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7441927	Thaps3611.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0405

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0113	0.35	50 470

Most Highly Correlated Transcripts

14315 FAD_binding_7 0.8519	10588 hypothetical protein 0.847	261414 2A0109 0.8402	2799 hypothetical protein 0.8394	18434 PIPKc superfamily 0.8345	2906 hypothetical protein 0.8322
bd410 (bd410) HNHc 0.8281	10400 hypothetical protein 0.828	6883 Peptidase_C19 superfamily 0.8264	37942 hypothetical protein 0.822

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
MIT_CorA-like superfamily		metal ion transporter CorA-like divalent cation transporter superfamily; This superfamily of...	-	64.1878	3.60E-12	147 - 278	superfamily	260436

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_37260	PHATRDRAFT_37260	Not available	287114	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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