36367 WD40
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
36367 chr_10 WD40 828360 829734 - WD40

Synonyms

NCBI ID Ensembl Genomes exon ID
7446900 Thaps36367.2, Thaps36367.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0103

Most Highly Correlated Transcripts

30701

PRK05279
0.9166

264809

SIR2 superfamily
0.9028

5812

hypothetical protein
0.9016

261981

0.9013

261278

GRX_GRXh_1_2_like
0.8984

36525

PRK09427
0.8974

4938

Methyltransf_6 superfamily
0.8942

261400

NA
0.8937

35136

NA
0.8929

264674

2OG-FeII_Oxy_3 superfamily
0.8913

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 233.381 5.52E-73 181 - 440 superfamily 238121
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 233.381 5.52E-73 181 - 440 superfamily 238121
COG2319 FOG: WD40 repeat [General function prediction only] - 70.8879 1.60E-13 54 - 268 multi-dom 225201
COG2319 FOG: WD40 repeat [General function prediction only] - 70.8879 1.60E-13 54 - 268 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_23077 PHATRDRAFT_23077 226355 94737 416720 Cre08.g367650.t1.2 AT3G49660.1 252422

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003847 -

GO:0003847

1-alkyl-2-acetylglycerophosphocholine esterase activity

Details: 
Catalysis of the reaction: 2-acetyl-1-alkyl-sn-glycero-3-phosphocholine + H2O = 1-alkyl-sn-glycero-3-phosphocholine + acetate.
GO Category: 
MF

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