36454 Ribosomal_L1
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
36454 chr_10 Ribosomal_L1 135150 136403 + Ribosomal_L1
NCBI ID Ensembl Genomes exon ID
7447006 Thaps36454.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0269
hypothetical protein
0.9015
hypothetical protein
0.8769
CtaG_Cox11 superfamily
0.8662
hypothetical protein
0.8649
hypothetical protein
0.8639
(MYB22)
0.8607
RPA_interact_C
0.8563
hypothetical protein
0.855
hypothetical protein
0.8546
hypothetical protein
0.8526
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ribosomal_L1 Ribosomal protein L1. The L1 protein, located near the E-site of the ribosome, forms part of the... cl00322 137.701 5.07E-38 179 - 395 specific 238235
Ribosomal_L1 superfamily Ribosomal protein L1. The L1 protein, located near the E-site of the ribosome, forms part of the... - 137.701 5.07E-38 179 - 395 superfamily 260353
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_14915 PHATRDRAFT_14915 166715 326719 Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003735 GO:0005622 GO:0005840 GO:0006412 -

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP
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