36774 PanC
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
36774 chr_12 PanC 157772 159133 - PanC

Synonyms

NCBI ID Ensembl Genomes exon ID
7449369 Thaps36774.3, Thaps36774.4, Thaps36774.1, Thaps36774.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0039

Most Highly Correlated Transcripts

30701

PRK05279
0.9293

261400

NA
0.9133

41655

Chloroa_b-bind
0.9053

3814

hypothetical protein
0.905

4064

NADB_Rossmann superfamily
0.9041

268257

fabG
0.8949

262977

NA
0.8816

6787

hypothetical protein
0.8778

24525

hypothetical protein
0.8772

20997

hypothetical protein
0.875

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PanC Pantoate-beta-alanine ligase; PanC Pantoate-beta-alanine ligase, also known as pantothenate... cl00015 376.875 1.63E-130 51 - 333 specific 185673
nt_trans superfamily nucleotidyl transferase superfamily; nt_trans (nucleotidyl transferase) This superfamily includes... - 376.875 1.63E-130 51 - 333 superfamily 260139

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_22955 PHATRDRAFT_22955 151596 297386 439738 Cre02.g090150.t1.2 AT5G48840.1 558541

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004592 GO:0015940 -

GO:0004592

pantoate-beta-alanine ligase activity

Details: 
Catalysis of the reaction: ATP + (R)-pantoate + beta-alanine = AMP + diphosphate + (R)-pantothenate.
GO Category: 
MF

GO:0015940

pantothenate biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of pantothenate, the anion of pantothenic acid. It is a B complex vitamin that is a constituent of coenzyme A and is distributed ubiquitously in foods.
GO Category: 
BP

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