36858 2A0114
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
36858 chr_12 2A0114 384805 386671 - 2A0114

Synonyms

NCBI ID Ensembl Genomes exon ID
7447522 Thaps36858.1, Thaps36858.3, Thaps36858.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0033

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0250
 0.30

Most Highly Correlated Transcripts

268592

VDE superfamily
0.9337

4465

hypothetical protein
0.9256

8872

hypothetical protein
0.9087

bd789

(bd789) ABC_ATPase superfamily
0.9086

36669

TPT
0.9059

8784

hypothetical protein
0.9023

7191

Aldo_ket_red
0.9021

16737

Mito_carr
0.902

1634

hypothetical protein
0.8997

262553

Voltage_gated_ClC
0.8991

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 126.66 2.67E-32 151 - 578 superfamily 119392
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 126.66 2.67E-32 151 - 578 superfamily 119392
2A0114 - 138.623 156 - 577 multi-dom 233174

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_21441 PHATRDRAFT_21441 195004 184874 61619 Cre08.g379550.t1.1 AT4G00370.1 508492

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005215 GO:0006810 GO:0016021 -

GO:0005215

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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