38609 HDAC_classIV
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
38609 chr_22 HDAC_classIV 720063 721619 + HDAC_classIV

Synonyms

NCBI ID Ensembl Genomes exon ID
7448215 Thaps38609.2, Thaps38609.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0299

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9879

24790

Nitro_FMN_reductase superfamily
0.9047

268358

hypothetical protein
0.9043

262821

AAA
0.8989

7929

hypothetical protein
0.8976

39726

NrfG
0.8972

30701

PRK05279
0.8933

1684

Ion_trans_2
0.8921

262261

PP2Cc
0.8919

25456

GH99_GH71_like_2
0.8912

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HDAC_classIV Histone deacetylase class IV also known as histone deacetylase 11; Class IV histone deacetylases (... cl17011 344.481 1.39E-115 165 - 477 specific 212519
Arginase_HDAC superfamily Arginase-like and histone-like hydrolases; Arginase-like/histone-like hydrolase superfamily... - 344.481 1.39E-115 165 - 477 superfamily 266496

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_4821 PHATR_4821 206810 161898 63461 Cre14.g632300.t1.1 AT5G26040.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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