40991 E1_enzyme_family superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
40991 chr_6 E1_enzyme_family superfamily 695638 697698 + E1_enzyme_family superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7448601 Thaps40991.3, Thaps40991.1, Thaps40991.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0377

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0119
 0.42

Most Highly Correlated Transcripts

22141

hypothetical protein
0.8904

268194

(Tp_Myb4R1b) SANT
0.8825

24094

hypothetical protein
0.8747

33033

YSH1
0.8616

4047

hypothetical protein
0.8574

34505

hypothetical protein
0.857

22918

hypothetical protein
0.8547

4071

hypothetical protein
0.8502

10533

hypothetical protein
0.8475

6922

hypothetical protein
0.8455

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
E1_enzyme_family superfamily Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes... - 315.783 7.30E-101 6 - 604 superfamily 266547

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_15355 PHATRDRAFT_15355 193404 214567 427944 Cre01.g002350.t1.1 AT1G05180.1 347908

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 GO:0004842 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

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