41658 FKBP_CThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
41658	chr_8	FKBP_C	1250856	1252509	-	FKBP_C

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452388	Thaps41658.3, Thaps41658.1, Thaps41658.2, Thaps41658.4, Thaps41658.5

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0275

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0182	0.48	0.011 8

Most Highly Correlated Transcripts

261607 IF4E 0.8821	7250 hypothetical protein 0.8808	39497 Sar1 0.8791	21482 NADH-u_ox-rdase 0.8777	25040 NA 0.8562	bd1327 (bd1327) DnaB 0.8551
30832 (RM11) Ribosomal_L11 0.8523	268257 fabG 0.8504	31637 PP2Cc 0.8472	38270 hypothetical protein 0.847

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
FKBP_C		FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase.	cl19519	111.564	1.01E-32	13 - 106	specific	249719
FKBP_C superfamily		FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase.	-	111.564	1.01E-32	13 - 106	superfamily	267872

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_30615	PHATRDRAFT_30615	185488	307872	235011	Cre13.g586300.t1.2	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0006457 GO:0003755 GO:0004600 GO:0030051 GO:0042027 -

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