4322 PLN00113Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
4322	chr_4	PLN00113	752839	755882	+	PLN00113

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452644	Thaps4322.3, Thaps4322.4, Thaps4322.2, Thaps4322.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0405

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0126	0.34	1.5 22000

Most Highly Correlated Transcripts

8489 GlcNAc superfamily 0.9141	11998 hypothetical protein 0.9104	1597 hypothetical protein 0.9026	32139 hypothetical protein 0.9018	20979 hypothetical protein 0.9014	22128 DENN 0.9008
261400 NA 0.8994	4565 hypothetical protein 0.8992	3493 hypothetical protein 0.8988	3349 Hus1 superfamily 0.8964

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PLN00113		leucine-rich repeat receptor-like protein kinase; Provisional	-	120.338	5.16E-28	533 - 858	multi-dom	215061

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_44263	PHATRDRAFT_44263	Not available	179879	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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