4603 COPIIcoated_ERV superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
4603 chr_4 COPIIcoated_ERV superfamily 1458206 1459223 - COPIIcoated_ERV superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7448833 Thaps4603.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0102

Most Highly Correlated Transcripts

261400

NA
0.9465

3204

hypothetical protein
0.9382

8338

hypothetical protein
0.9353

37934

GRX_PICOT_like
0.932

9115

DnaJ
0.9297

33075

RimI
0.927

7469

hypothetical protein
0.926

21168

hypothetical protein
0.9243

263536

P4Hc
0.9227

33353

TRX_family
0.9204

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
COPIIcoated_ERV superfamily Endoplasmic reticulum vesicle transporter; This family is conserved from plants and fungi to humans... - 122.409 7.15E-33 146 - 322 superfamily 254553
ERGIC_N superfamily Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC); This family is the N-terminal of... - 71.3686 9.86E-16 3 - 94 superfamily 258122

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_50271 PHATRDRAFT_50271 Not available 311716 Not available Not available Not available 295009

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments