5188 pyrophosphatase
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5188 chr_5 pyrophosphatase 571414 572513 + pyrophosphatase

Synonyms

NCBI ID Ensembl Genomes exon ID
7451774 Thaps5188.1, Thaps5188.2, Thaps5188.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0024

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0118
 0.28

Most Highly Correlated Transcripts

bd1306

(bd1306) NA
0.9544

bd218

(bd218) Chloroa_b-bind superfamily
0.9499

bd1645

(bd1645) tpt
0.9479

bd1403

(bd1403) NA
0.9429

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9392

bd1342

(bd1342) psaL
0.9368

bd760

(bd760) ZnMc superfamily
0.9332

bd1304

(bd1304) Ycf4
0.931

bd1820

(bd1820) Fasciclin
0.9265

bd466

(bd466) cytochrome_b_C
0.9221

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
pyrophosphatase Inorganic pyrophosphatase. These enzymes hydrolyze inorganic pyrophosphate (PPi) to two molecules... cl00217 176.898 1.42E-54 81 - 259 specific 238239
pyrophosphatase superfamily Inorganic pyrophosphatase. These enzymes hydrolyze inorganic pyrophosphate (PPi) to two molecules... - 176.898 1.42E-54 81 - 259 superfamily 260270

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_32923 PHATRDRAFT_32923 191696 204465 436192 Not available AT5G09650.1 350197

KEGG

KEGG description KEGG Pathway
Oxidative phosphorylation map00190

GO Terms

GO:0000287 GO:0008152 GO:0016462 GO:0004427 GO:0005737 -

GO:0000287

magnesium ion binding

Details: 
Interacting selectively and non-covalently with magnesium (Mg) ions.
GO Category: 
MF

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016462

pyrophosphatase activity

Details: 
Catalysis of the hydrolysis of a pyrophosphate bond between two phosphate groups, leaving one phosphate on each of the two fragments.
GO Category: 
MF

GO:0004427

inorganic diphosphatase activity

Details: 
Catalysis of the reaction: diphosphate + H(2)O = H(+) + 2 phosphate.
GO Category: 
MF

GO:0005737

cytoplasm

Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO Category: 
CC

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