5323 COG0802
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5323 chr_5 COG0802 907745 909412 - COG0802

Synonyms

NCBI ID Ensembl Genomes exon ID
7446456 Thaps5323.1, Thaps5323.2, Thaps5323.5, Thaps5323.3, Thaps5323.4

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0288

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0016
 0.55

Most Highly Correlated Transcripts

bd1765

(bd1765) NA
0.9341

bd208

(bd208) DUF3529
0.9295

bd1820

(bd1820) Fasciclin
0.9267

bd1380

(bd1380) ycf39
0.9245

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9193

bd687

(bd687) NA
0.9162

bd1306

(bd1306) NA
0.9142

bd1652

(bd1652) ABC_ATPase superfamily
0.912

bd258

(bd258) HU
0.9118

bd1078

(bd1078) NA
0.9037

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
COG0802 Predicted ATPase or kinase [General function prediction only] cl00520 129.675 1.18E-35 287 - 449 specific 223873
UPF0079 superfamily Uncharacterized P-loop hydrolase UPF0079; This uncharacterized family contains a P-loop. - 129.675 1.18E-35 287 - 449 superfamily 260474

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_37266 PHATRDRAFT_37266 260636 203500 455136 Cre12.g547000.t1.2 Not available 294711

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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