5500 (PDK1_2) PRK09279
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5500 chr_5 (PDK1_2) PRK09279 1377133 1380283 - PRK09279

Synonyms

NCBI ID Ensembl Genomes exon ID
7450100 Thaps5500.5, Thaps5500.1, Thaps5500.4, Thaps5500.3, Thaps5500.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0003

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0059
 0.44

Most Highly Correlated Transcripts

bd885

(bd885) NA
0.9261

bd884

(bd884) NA
0.8918

bd415

(bd415) arom_aa_hydroxylase superfamily
0.8845

bd1439

(bd1439) ycf35
0.8738

bd1954

(bd1954) NA
0.8574

bd1841

(bd1841) CAP10 superfamily
0.8531

bd1786

(bd1786) GLTP superfamily
0.8166

bd1787

(bd1787) GLTP
0.8129

bd1808

(bd1808) NA
0.8108

bd1934

(bd1934) NA
0.806

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PEP-utilizers_C superfamily PEP-utilizing enzyme, TIM barrel domain; PEP-utilizing enzyme, TIM barrel domain. - 286.096 1.45E-88 530 - 891 superfamily 251603
PPDK_N superfamily Pyruvate phosphate dikinase, PEP/pyruvate binding domain; This enzyme catalyses the reversible... - 161.076 1.81E-43 21 - 361 superfamily 250534
PPDK_N superfamily Pyruvate phosphate dikinase, PEP/pyruvate binding domain; This enzyme catalyses the reversible... - 161.076 1.81E-43 21 - 361 superfamily 250534
PEP-utilizers PEP-utilizing enzyme, mobile domain; This domain is a "swivelling" beta/beta/... cl17700 79.924 8.00E-18 430 - 511 specific 249825
PEP-utilizers superfamily PEP-utilizing enzyme, mobile domain; This domain is a "swivelling" beta/beta/... - 79.924 8.00E-18 430 - 511 superfamily 266778
PRK09279 pyruvate phosphate dikinase; Provisional - 1392.53 0 5 - 900 multi-dom 236446

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_21988 PHATRDRAFT_21988 252182 15632 Not available Cre10.g424750.t1.2 AT4G15530.4 343277

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0016310 GO:0016772 GO:0005524 GO:0016301 GO:0050242 -

GO:0016310

phosphorylation

Details: 
The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
GO Category: 
BP

GO:0016772

transferase activity, transferring phosphorus-containing groups

Details: 
Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor).
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0016301

kinase activity

Details: 
Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
GO Category: 
MF

GO:0050242

pyruvate, phosphate dikinase activity

Details: 
Catalysis of the reaction: ATP + phosphate + pyruvate = AMP + diphosphate + 2 H(+) + phosphoenolpyruvate.
GO Category: 
MF

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