6461 CIAPIN1Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
6461	chr_6	CIAPIN1	1636945	1637983	-	CIAPIN1

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442774	Thaps6461.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0144

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0041	0.50

Most Highly Correlated Transcripts

25506 hypothetical protein 0.8694	6087 hypothetical protein 0.8662	21240 hypothetical protein 0.854	6889 hypothetical protein 0.8465	5921 hypothetical protein 0.8434	35360 Autophagy_N 0.8433
34514 PLN02539 0.8399	4007 MDR1 0.8386	23804 hypothetical protein 0.8338	40496 EMP70 superfamily 0.8326

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CIAPIN1 superfamily		Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis; Anamorsin, subsequently named CIAPIN1...	-	101.348	1.72E-26	270 - 335	superfamily	253002
CIAPIN1 superfamily		Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis; Anamorsin, subsequently named CIAPIN1...	-	101.348	1.72E-26	270 - 335	superfamily	253002

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_47020	PHATRDRAFT_47020	269413	302253	Not available	Cre11.g475350.t1.1	AT5G18400.1	284771

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005509 -

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