6534 DER1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
6534 chr_6 DER1 1819241 1820071 - DER1

Synonyms

NCBI ID Ensembl Genomes exon ID
7446340 Thaps6534.2, Thaps6534.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0431

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0007
 0.40

Most Highly Correlated Transcripts

10474

hypothetical protein
0.906

12021

hypothetical protein
0.8998

2732

Cyclophilin_PPIL3_like
0.8966

25535

hypothetical protein
0.8953

21429

hypothetical protein
0.8924

6087

hypothetical protein
0.8921

25350

Methyltransf_24
0.8889

8445

hypothetical protein
0.8887

13448

Sec1
0.8867

23792

Lipase_3
0.8851

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DER1 Der1-like family; The endoplasmic reticulum (ER) of the yeast Saccharomyces cerevisiae contains of... cl17806 177.857 2.47E-55 29 - 208 specific 252642
DER1 superfamily Der1-like family; The endoplasmic reticulum (ER) of the yeast Saccharomyces cerevisiae contains of... - 177.857 2.47E-55 29 - 208 superfamily 266852

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_28348 PHATRDRAFT_28348 196204 295918 99592 Cre15.g636400.t1.1 AT4G04860.1 490756

KEGG

KEGG description KEGG Pathway
Protein processing in endoplasmic reticulum map04141

GO Terms

Not available -

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