7220 WLM superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
7220 chr_7 WLM superfamily 1629504 1630925 + WLM superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7447165 Thaps7220.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0102

Most Highly Correlated Transcripts

5584

P4Hc
0.9033

5659

hypothetical protein
0.885

262671

hypothetical protein
0.8798

8288

hypothetical protein
0.8754

5623

COG0637
0.8727

7444

hypothetical protein
0.8713

263035

HP_PGM_like
0.8672

1850

PKc_like superfamily
0.8639

5615

Ric8 superfamily
0.8607

20615

hypothetical protein
0.8598

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WLM superfamily WLM domain; This is a predicted metallopeptidase domain called WLM (Wss1p-like metalloproteases).... - 108.945 7.20E-28 59 - 284 superfamily 254730

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_31986 PHATRDRAFT_31986 Not available 43467 Not available Cre07.g333850.t1.1 AT1G55915.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006508 GO:0008237 GO:0008270 -

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008237

metallopeptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

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