7805 Aldo_ket_redThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
7805	chr_8	Aldo_ket_red	1178204	1179658	+	Aldo_ket_red

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444957	Thaps7805.2, Thaps7805.1, Thaps7805.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0054

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0108	0.45	0.00031 42

Most Highly Correlated Transcripts

3438 hypothetical protein 0.8706	39941 PRK13357 0.8459	6735 hypothetical protein 0.8422	1407 hypothetical protein 0.8164	5276 Aldo_ket_red 0.8157	1951 hypothetical protein 0.8113
38306 Chloroa_b-bind 0.811	38964 Chorismate_synthase 0.8096	11460 hypothetical protein 0.8092	20024 FKBP_C 0.809

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Aldo_ket_red		Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief...	cl00470	269.814	1.38E-87	45 - 390	specific	119408
Aldo_ket_red superfamily		Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief...	-	269.814	1.38E-87	45 - 390	superfamily	260445
Kv_beta		voltage-dependent potassium channel beta subunit, animal; This model describes the conserved core...	-	111.179	8.21E-28	45 - 390	multi-dom	213602

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_42255	PHATRDRAFT_42255	174566	66544	68207	Cre10.g461900.t1.2	AT1G04420.1	552261

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0016491 GO:0047681 -

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