681 PotE
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
681 chr_11a PotE 423984 428722 - PotE

Synonyms

NCBI ID Ensembl Genomes exon ID
7448318 Thaps681.4, Thaps681.2, Thaps681.1, Thaps681.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0234

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0019
 0.40

Most Highly Correlated Transcripts

3981

hypothetical protein
0.905

bd938

(bd938) PBP2_NikA_DppA_OppA_like superfamily
0.8625

bd1948

(bd1948) NA
0.8445

bd616

(bd616) NA
0.8338

bd1877

(bd1877) NA
0.832

bd409

(bd409) Snf7 superfamily
0.8051

bd1875

(bd1875) NA
0.8033

bd1802

(bd1802) NA
0.7861

bd1835

(bd1835) NA
0.7859

bd739

(bd739) NA
0.7774

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PotE Amino acid transporters [Amino acid transport and metabolism] - 134.907 4.63E-34 241 - 649 multi-dom 223605

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_11160 PHATRDRAFT_11160 Not available Not available 52699 Cre06.g292350.t1.2 AT3G19553.1 549645

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005279 GO:0006865 GO:0016020 -

GO:0005279

NA

Details: 
NA
GO Category: 
NA

GO:0006865

amino acid transport

Details: 
The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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