7025 (Tp_Myb2R6) L-asparaginase_like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
7025 chr_7 (Tp_Myb2R6) L-asparaginase_like superfamily 1066924 1068246 + L-asparaginase_like superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7447065 Thaps7025.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0078

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0040
 0.39

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9457

6481

hypothetical protein
0.9293

1871

hypothetical protein
0.9184

21909

(Tp_bZIP17) regulator [Rayko]
0.9176

7588

hypothetical protein
0.9166

4603

COPIIcoated_ERV superfamily
0.9133

4249

hypothetical protein
0.9097

4260

WD40
0.9093

2463

hypothetical protein
0.9076

33075

RimI
0.9075

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
L-asparaginase_like superfamily Bacterial L-asparaginases and related enzymes; Asparaginases (amidohydrolases, E.C. 3.5.1.1) are... - 83.1071 7.68E-18 255 - 414 superfamily 260269

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 235032 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0005634 GO:0006520 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006520

cellular amino acid metabolic process

Details: 
The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.
GO Category: 
BP

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