7229 (tpi) TIM
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
7229 chr_7 (tpi) TIM 1648660 1649850 + TIM

Synonyms

NCBI ID Ensembl Genomes exon ID
7450569 Thaps7229.1, Thaps7229.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0073

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0027
 0.38

Most Highly Correlated Transcripts

bd258

(bd258) HU
0.9036

bd1765

(bd1765) NA
0.8887

bd1306

(bd1306) NA
0.8878

bd208

(bd208) DUF3529
0.8841

bd718

(bd718) PRK10387
0.8793

bd218

(bd218) Chloroa_b-bind superfamily
0.8729

bd1160

(bd1160) Chloroa_b-bind superfamily
0.8726

bd1820

(bd1820) Fasciclin
0.8574

bd1645

(bd1645) tpt
0.8536

bd846

(bd846) NA
0.8498

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of... cl17186 317.941 8.55E-109 6 - 263 specific 238190
TIM_phosphate_binding superfamily TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an... - 317.941 8.55E-109 6 - 263 superfamily 266538

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 191478 298789 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004807 GO:0008152 -

GO:0004807

triose-phosphate isomerase activity

Details: 
Catalysis of the reaction: D-glyceraldehyde 3-phosphate = glycerone phosphate.
GO Category: 
MF

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

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