1215 E1_enzyme_family superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1215 chr_1 E1_enzyme_family superfamily 944708 945736 + E1_enzyme_family superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7445639 Thaps1215.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0186

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0054
 0.44

Most Highly Correlated Transcripts

5137

hypothetical protein
0.9285

30701

PRK05279
0.9263

11490

hypothetical protein
0.9259

2540

hypothetical protein
0.9214

4674

zf-DHHC
0.9165

25068

hypothetical protein
0.9163

35314

GSH_Peroxidase
0.9157

3180

hypothetical protein
0.9148

10898

hypothetical protein
0.9141

2312

hypothetical protein
0.914

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
E1_enzyme_family superfamily Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes... - 78.8715 1.21E-17 1 - 329 superfamily 266547

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_40111 PHATRDRAFT_40111 180734 209398 Not available Not available AT5G50580.2 471007

KEGG

KEGG description KEGG Pathway
Ubiquitin mediated proteolysis map04120

GO Terms

GO:0003824 GO:0004842 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

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