7696 2_5_RNA_ligase2
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
7696 chr_8 2_5_RNA_ligase2 900839 902093 - 2_5_RNA_ligase2

Synonyms

NCBI ID Ensembl Genomes exon ID
7449846 Thaps7696.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0137

Most Highly Correlated Transcripts

23170

hypothetical protein
0.9264

5584

P4Hc
0.9206

262193

FHA
0.9189

3265

zf-C3HC superfamily
0.917

2732

Cyclophilin_PPIL3_like
0.9166

263006

P4Hc
0.9158

22677

hypothetical protein
0.9152

25350

Methyltransf_24
0.9143

268830

CAP10 superfamily
0.9131

7444

hypothetical protein
0.9113

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
2_5_RNA_ligase2 2'-5' RNA ligase superfamily; This family contains proteins related to pfam02834... - 105.963 2.60E-27 166 - 360 multi-dom 257880

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_50571 PHATRDRAFT_50571 258270 193662 206857 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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