7953 AIM24Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
7953	chr_9	AIM24	353403	354426	-	AIM24

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443512	Thaps7953.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0196

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0032	0.47	3.5 20000

Most Highly Correlated Transcripts

4108 hypothetical protein 0.9179	32022 SPFH_paraslipin 0.9073	16295 FBPase 0.8994	35728 FtsZ_type1 0.8802	9247 hypothetical protein 0.8788	26224 SPFH_prohibitin 0.8782
13448 Sec1 0.8757	262271 PIP5K 0.8724	269556 DEADc 0.872	2543 hypothetical protein 0.8691

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AIM24		Mitochondrial biogenesis AIM24; In eukaryotes, this domain is involved in mitochondrial biogenesis...	cl00884	190.107	1.30E-58	83 - 292	specific	251018
AIM24 superfamily		Mitochondrial biogenesis AIM24; In eukaryotes, this domain is involved in mitochondrial biogenesis...	-	190.107	1.30E-58	83 - 292	superfamily	260679

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_5132	PHATRDRAFT_5132	152637	283654	444559	Not available	AT5G47420.1	509459

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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