8110 HSBP1Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
8110	chr_9	HSBP1	802202	802687	+	HSBP1

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448094	Thaps8110.1, Thaps8110.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0094

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0068	0.42	0.55 0.59

Most Highly Correlated Transcripts

7505 hypothetical protein 0.8938	10073 hypothetical protein 0.8738	6130 hypothetical protein 0.8711	20405 GRX_GRXh_1_2_like 0.8698	1210 hypothetical protein 0.8632	3071 NA 0.8615
1243 hypothetical protein 0.8559	1908 hypothetical protein 0.85	7617 hypothetical protein 0.8483	6204 hypothetical protein 0.848

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
HSBP1 superfamily		Heat shock factor binding protein 1; Heat shock factor binding protein 1 (HSBP1) appears to be a...	-	67.689	2.71E-16	25 - 78	superfamily	148437
HSBP1 superfamily		Heat shock factor binding protein 1; Heat shock factor binding protein 1 (HSBP1) appears to be a...	-	67.689	2.71E-16	25 - 78	superfamily	148437

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_36485	PHATRDRAFT_36485	Not available	Not available	Not available	Cre07.g329800.t1.2	AT4G15802.1	346416

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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