8576 Ion_trans_2
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
8576 chr_10 Ion_trans_2 972579 976876 - Ion_trans_2

Synonyms

NCBI ID Ensembl Genomes exon ID
7449334 Thaps8576.4, Thaps8576.1, Thaps8576.5, Thaps8576.3, Thaps8576.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0449

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0113
 0.35

Most Highly Correlated Transcripts

12836

EEP superfamily
0.9281

9491

hypothetical protein
0.9261

25457

hypothetical protein
0.9077

20915

hypothetical protein
0.899

6378

hypothetical protein
0.8972

1943

(Tp_HSF_2.6e) HSF_DNA-bind superfamily
0.8969

22168

DUF221 superfamily
0.8959

25619

hypothetical protein
0.8958

8130

hypothetical protein
0.8939

262157

E1_like_apg7
0.8924

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ion_trans_2 superfamily Ion channel; This family includes the two membrane helix type ion channels found in bacteria. - 65.3541 1.44E-12 730 - 792 superfamily 254488
Ion_trans_2 superfamily Ion channel; This family includes the two membrane helix type ion channels found in bacteria. - 65.3541 1.44E-12 730 - 792 superfamily 254488
Ion_trans_2 superfamily Ion channel; This family includes the two membrane helix type ion channels found in bacteria. - 65.3541 1.44E-12 730 - 792 superfamily 254488
Ion_trans_2 superfamily Ion channel; This family includes the two membrane helix type ion channels found in bacteria. - 65.3541 1.44E-12 730 - 792 superfamily 254488

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_44021 PHATR_44021 160610 260668 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005267 GO:0006813 GO:0016020 -

GO:0005267

potassium channel activity

Details: 
Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism.
GO Category: 
MF

GO:0006813

potassium ion transport

Details: 
The directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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