8700 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
8700 chr_11a hypothetical protein 246986 248081 - hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7443279 Thaps8700.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0468

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0209
 0.34

Most Highly Correlated Transcripts

bd1877

(bd1877) NA
0.8737

263792

(ubi6r)
0.8389

bd409

(bd409) Snf7 superfamily
0.8343

bd453

(bd453) Mito_carr
0.8222

bd1946

(bd1946) NA
0.8182

bd1835

(bd1835) NA
0.8157

bd1840

(bd1840) NA
0.8099

bd938

(bd938) PBP2_NikA_DppA_OppA_like superfamily
0.8024

bd933

(bd933) NA
0.7965

264152

0.7948

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004623 GO:0005509 GO:0016042 -

GO:0004623

phospholipase A2 activity

Details: 
Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate.
GO Category: 
MF

GO:0005509

calcium ion binding

Details: 
Interacting selectively and non-covalently with calcium ions (Ca2+).
GO Category: 
MF

GO:0016042

lipid catabolic process

Details: 
The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
GO Category: 
BP

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