1254 Chalcone superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1254 chr_1 Chalcone superfamily 1052288 1053592 + Chalcone superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7445272 Thaps1254.1, Thaps1254.2, Thaps1254.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0024

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0225
 0.26

Most Highly Correlated Transcripts

270222

0.9573

bd1857

(bd1857) DnaJ
0.9437

bd1306

(bd1306) NA
0.9257

bd1645

(bd1645) tpt
0.9217

38306

Chloroa_b-bind
0.9196

bd208

(bd208) DUF3529
0.9187

bd1403

(bd1403) NA
0.915

bd1380

(bd1380) ycf39
0.914

1875

hypothetical protein
0.9132

21517

Methyltransf_6 superfamily
0.9086

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Chalcone superfamily Chalcone-flavanone isomerase; Chalcone-flavanone isomerase is a plant enzyme responsible for the... - 61.0784 7.76E-12 72 - 244 superfamily 261798

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_37171 PHATRDRAFT_37171 218376 196071 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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