8967 ANKThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
8967	chr_12	ANK	186411	187402	-	ANK

Synonyms

NCBI ID	Ensembl Genomes exon ID
7449372	Thaps8967.2, Thaps8967.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0168

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0096	0.39	0.00000031 0.00000074

Most Highly Correlated Transcripts

20752 hypothetical protein 0.8387	1692 hypothetical protein 0.8322	10041 hypothetical protein 0.8241	bd1877 (bd1877) NA 0.8239	11147 HP_PGM_like 0.8178	bd1667 (bd1667) Mpp10 0.816
21568 hypothetical protein 0.8111	11588 hypothetical protein 0.8086	3650 hypothetical protein 0.807	4824 hypothetical protein 0.8048

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	69.7198	2.39E-15	55 - 169	superfamily	238125
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	69.7198	2.39E-15	55 - 169	superfamily	238125
Ank_2		Ankyrin repeats (3 copies); Ankyrin repeats (3 copies).	-	58.0363	2.98E-11	56 - 137	multi-dom	257303

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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