12758 PLN00113Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
12758	chr_19a_19	PLN00113	406273	413772	-	PLN00113

Synonyms

NCBI ID	Ensembl Genomes exon ID
7449933	Thaps12758.1, Thaps12758.3, Thaps12758.6, Thaps12758.5, Thaps12758.4, Thaps12758.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0354

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0026	0.39

Most Highly Correlated Transcripts

4108 hypothetical protein 0.927	bd938 (bd938) PBP2_NikA_DppA_OppA_like superfamily 0.8789	bd824 (bd824) NA 0.8147	bd1948 (bd1948) NA 0.7997	bd1891 (bd1891) COG3899 0.7913	262568 CDC48 0.7909
263864 0.7818	bd616 (bd616) NA 0.7814	8234 hypothetical protein 0.7719	bd1487 (bd1487) PLN02688 0.7678

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PLN00113		leucine-rich repeat receptor-like protein kinase; Provisional	-	190.059	3.09E-53	1 - 365	multi-dom	215061

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_16261	PHATRDRAFT_16261	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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