9471 SEC-C superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
9471 chr_13 SEC-C superfamily 504258 505122 - SEC-C superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7446929 Thaps9471.1, Thaps9471.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0321

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0258
 0.30

Most Highly Correlated Transcripts

bd1161

(bd1161) NA
0.8702

11487

PhyH superfamily
0.864

bd1757

(bd1757) NA
0.86

16372

Aldo_ket_red
0.8528

6798

PRK06476
0.8401

17811

NA
0.8343

bd718

(bd718) PRK10387
0.8292

bd1857

(bd1857) DnaJ
0.8278

bd1758

(bd1758) NA
0.8248

bd298

(bd298) ABM superfamily
0.8223

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SEC-C superfamily SEC-C motif; The SEC-C motif found in the C-terminus of the SecA protein, in the middle of some... - 57.5097 8.57E-11 95 - 236 superfamily 267742

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45498 PHATRDRAFT_45498 273245 183321 196824 Cre05.g241639.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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