9727 DUF4200Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
9727	chr_14	DUF4200	196157	196783	+	DUF4200

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451644	Thaps9727.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0489

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0145	0.29	0.0013 1.1

Most Highly Correlated Transcripts

262692 0.8809	6571 hypothetical protein 0.7973	12090 hypothetical protein 0.7694	11647 hypothetical protein 0.7665	4108 hypothetical protein 0.7408	11243 hypothetical protein 0.7196
1527 hypothetical protein 0.6748	5488 CAP_ED 0.6514	2058 hypothetical protein 0.6508	25803 hypothetical protein 0.6409

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF4200		Domain of unknown function (DUF4200); This family is found in eukaryotes. It is a coiled-coil...	-	72.2691	2.01E-16	18 - 135	multi-dom	258133

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	202116	Cre16.g689600.t1.2	Not available	488998

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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