bd1380 (bd1380) ycf39
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
bd1380 bd_26x41 (bd1380) ycf39 1363 2322 - ycf39

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0069

Most Highly Correlated Transcripts

ThpsCp070

(ycf39) Ycf39
1

bd1403

(bd1403) NA
0.9763

ThpsCp071

(ycf41) hypothetical protein
0.9763

bd208

(bd208) DUF3529
0.9689

31566

MBOAT superfamily
0.9688

31636

Aldose_epim superfamily
0.966

bd1306

(bd1306) NA
0.9659

ThpsCp069

(cbbX) CbbX
0.9659

5434

hypothetical protein
0.958

24876

hypothetical protein
0.9535

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SDR_a5 atypical (a) SDRs, subgroup 5; This subgroup contains atypical SDRs, some of which are identified... cl09931 201.695 2.36E-63 4 - 206 specific 187554
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 201.695 2.36E-63 4 - 206 superfamily 263925
ycf39 Ycf39; Provisional - 596.597 0 1 - 317 multi-dom 177093

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Cre02.g142146.t1.1 AT4G35250.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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