bd1662 (bd1662) TIGR00367
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
bd1662 bd_19x4 (bd1662) TIGR00367 16143 18799 + TIGR00367

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0209

Most Highly Correlated Transcripts

31912

(PPI1) cyclophilin_ABH_like
0.9357

42508

WD40
0.9218

24538

hypothetical protein
0.9192

7906

CreA superfamily
0.9191

24555

hypothetical protein
0.9121

5045

hypothetical protein
0.9113

2577

hypothetical protein
0.9071

22963

WD40 superfamily
0.9058

204

ATPase-IIA1_Ca
0.902

8524

pntA
0.9006

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Na_Ca_ex superfamily Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral membrane... - 88.8132 1.26E-20 134 - 255 superfamily 250805
Na_Ca_ex superfamily Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral membrane... - 88.8132 1.26E-20 134 - 255 superfamily 250805
Na_Ca_ex superfamily Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral membrane... - 88.8132 1.26E-20 134 - 255 superfamily 250805
Na_Ca_ex superfamily Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral membrane... - 88.8132 1.26E-20 134 - 255 superfamily 250805
TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein; This model models a family of bacterial and... - 150.937 5.30E-41 125 - 612 multi-dom 232943

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_17199 PHATRDRAFT_17199 206099 196275 Not available Not available Not available 496439

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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