bd911 (bd911) GH18_chitinase-like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
bd911 bd_23x33 (bd911) GH18_chitinase-like superfamily 23396 24802 + GH18_chitinase-like superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0465

Most Highly Correlated Transcripts

34442

CAP_ED
0.9683

10814

hypothetical protein
0.9175

bd909

(bd909) NA
0.9128

25181

hypothetical protein
0.9074

24363

SbcC
0.9034

34043

PKc_like superfamily
0.8957

38157

(FCT1) GDP-L-fucose transporter
0.8935

21888

hypothetical protein
0.8747

11330

hypothetical protein
0.8713

6797

hypothetical protein
0.8678

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GH18_chitinase-like superfamily The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer... - 244.462 5.04E-78 8 - 266 superfamily 263970
Glyco_18 Glyco_18 domain; Glyco_18 domain. - 225.25 1.81E-70 8 - 319 multi-dom 214753

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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