bd980 (bd980) chlIThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
bd980	bd_26x41	(bd980) chlI	18925	19986	+	chlI

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0256

Most Highly Correlated Transcripts

ThpsCp043 (chlI) Mg-protoporyphyrin IX chelatase 1	bd1039 (bd1039) psbV 0.8838	ThpsCp005 (psbV) photosystem II cytochrome c550 0.8838	ThpsCp082 (rpl34) ribosomal protein L34 0.859	ThpsCp134 (rpl34) ribosomal protein L34 0.859	1075 mTERF superfamily 0.8503
ThpsCp075 (ycf89) hypothetical protein 0.85	ThpsCp142 (ycf89') hypothetical protein 0.85	22608 hypothetical protein 0.847	ThpsCp057 (secG) preprotein translocase SecG subunit 0.8449

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
chlI		Mg-protoporyphyrin IX chelatase	-	751.046	0	1 - 350	multi-dom	177020

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	204033	Not available	Not available	Cre06.g306300.t1.2	AT5G45930.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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