10336 DUF3506 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
10336 chr_16a DUF3506 superfamily 71867 73387 + DUF3506 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7449965 Thaps10336.2, Thaps10336.1, Thaps10336.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0020

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0090
 0.39

Most Highly Correlated Transcripts

20899

(Tp_bHLH2_PAS) regulator [Rayko]
0.8755

26769

ERG4_ERG24 superfamily
0.8615

3770

DUF3506 superfamily
0.8577

2063

hypothetical protein
0.8568

9688

(Tp_bZIP7a/PAS) regulator [Rayko]
0.8503

268070

Trp-synth-beta_II superfamily
0.8345

3071

NA
0.8308

268592

VDE superfamily
0.8186

24832

hypothetical protein
0.8178

1785

(Tp_HSF_1.3d) HSF_DNA-bind superfamily
0.8144

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUF3506 superfamily Domain of unknown function (DUF3506); This presumed domain is functionally uncharacterized. This... - 72.4249 2.05E-15 226 - 333 superfamily 256800

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_37655 PHATRDRAFT_37655 139208 186093 440435 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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