17935 DnaQ_like_exo superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
17935 chr_6 DnaQ_like_exo superfamily 743571 746624 - DnaQ_like_exo superfamily
NCBI ID Ensembl Genomes exon ID
7443598 Thaps17935.1, Thaps17935.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0243
Syja_N
0.939
(MAPKKK) S_TKc
0.9339
(Tp_CCCH12) YTH1
0.9187
2OG-FeII_Oxy_2
0.9178
Glyco_hydro_47
0.917
NhaP
0.9145
SNF2_N
0.9138
hypothetical protein
0.9136
Peptidase_M36
0.9131
hypothetical protein
0.9027
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DnaQ_like_exo superfamily DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily; The DnaQ-like... - 257.911 1.96E-79 287 - 490 superfamily 263941
HRDC HRDC domain; The HRDC (Helicase and RNase D C-terminal) domain has a putative role in nucleic acid... cl02578 69.1168 3.85E-14 531 - 598 specific 249966
HRDC superfamily HRDC domain; The HRDC (Helicase and RNase D C-terminal) domain has a putative role in nucleic acid... - 69.1168 3.85E-14 531 - 598 superfamily 261358
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_22703 PHATRDRAFT_22703 178610 180581 419006 Cre12.g512250.t1.1 AT1G54440.1 553621
KEGG description KEGG Pathway
RNA degradation map03018
GO:0003676 GO:0005622 GO:0008408 -

nucleic acid binding

Details: 
Interacting selectively and non-covalently with any nucleic acid.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

3'-5' exonuclease activity

Details: 
Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end.
GO Category: 
MF
Log in to post comments