18099 (NIFU_2) Nfu_N
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
18099 chr_14 (NIFU_2) Nfu_N 150011 151066 + Nfu_N

Synonyms

NCBI ID Ensembl Genomes exon ID
7451637 Thaps18099.2, Thaps18099.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0434

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0018
 0.42

Most Highly Correlated Transcripts

bd415

(bd415) arom_aa_hydroxylase superfamily
0.9028

bd1808

(bd1808) NA
0.8904

35136

NA
0.8773

270222

0.8759

bd1841

(bd1841) CAP10 superfamily
0.8743

bd410

(bd410) HNHc
0.8704

2996

hypothetical protein
0.8695

1428

hypothetical protein
0.8652

7607

Methyltransf_31
0.8628

4535

hypothetical protein
0.858

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Nfu_N Scaffold protein Nfu/NifU N terminal; This domain is found at the N terminus of NifU and NifU... cl07364 115.275 7.75E-32 88 - 179 specific 254992
Nfu_N superfamily Scaffold protein Nfu/NifU N terminal; This domain is found at the N terminus of NifU and NifU... - 115.275 7.75E-32 88 - 179 superfamily 263317
COG0694 Thioredoxin-like proteins and domains [Posttranslational modification, protein turnover, chaperones] cl00484 110.85 4.18E-30 196 - 273 specific 223766
NifU superfamily NifU-like domain; This is an alignment of the carboxy-terminal domain. This is the only common... - 110.85 4.18E-30 196 - 273 superfamily 241897

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_16693 PHATRDRAFT_16693 161337 255540 351950 Cre12.g504150.t1.2 AT3G20970.1 317963

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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