19106 cyclophilin superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
19106	chr_10	cyclophilin superfamily	845477	846796	+	cyclophilin superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7446904	Thaps19106.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0307

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0019	0.40	0.000000047 0.0044

Most Highly Correlated Transcripts

23243 hypothetical protein 0.7812	11265 hypothetical protein 0.7766	269655 PRK09330 0.7689	9575 hypothetical protein 0.7675	12836 EEP superfamily 0.7643	40200 TRX_reduct 0.7623
21090 hypothetical protein 0.7619	9291 hypothetical protein 0.7601	2660 hypothetical protein 0.7448	21364 Peptidase_C19 superfamily 0.7431

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
cyclophilin superfamily		cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic...	-	210.191	8.13E-66	112 - 280	superfamily	260252

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATR_10350	PHATR_10350	213060	325551	464796	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0006457 GO:0003755 GO:0004600 GO:0030051 GO:0042027 -

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