PHATRDRAFT_42443 wd-40 repeat (WD40 superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_42443 chr_1 wd-40 repeat (WD40 superfamily) 73571 76858 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0410

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0193
 0.36

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 74.6788 9.97E-15 802 - 1060 superfamily 238121
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 74.6788 9.97E-15 802 - 1060 superfamily 238121
COG2319 FOG: WD40 repeat [General function prediction only] - 68.5767 4.24E-12 792 - 1092 multi-dom 225201
COG2319 FOG: WD40 repeat [General function prediction only] - 68.5767 4.24E-12 792 - 1092 multi-dom 225201
COG2319 FOG: WD40 repeat [General function prediction only] - 68.5767 4.24E-12 792 - 1092 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
2222 Not available 234794 6637 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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