PHATRDRAFT_17172 gtp-binding protein (PRK00093)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_17172 chr_1 gtp-binding protein (PRK00093) 113258 115084 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0004

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0085
 0.45

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EngA2 EngA2 GTPase contains the second domain of EngA; This EngA2 subfamily CD represents the second... cl17170 245.805 3.63E-78 249 - 428 specific 206682
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 213.451 4.49E-66 73 - 236 superfamily 266525
EngA1 EngA1 GTPase contains the first domain of EngA; This EngA1 subfamily CD represents the first GTPase... cl17170 213.451 4.49E-66 73 - 236 specific 206681
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 213.451 4.49E-66 73 - 236 superfamily 266525
KH_dom-like superfamily KH-domain-like of EngA bacterial GTPase enzymes, C-terminal; The KH-like domain at the C-terminus... - 133.325 1.56E-37 437 - 519 superfamily 258851
KH_dom-like superfamily KH-domain-like of EngA bacterial GTPase enzymes, C-terminal; The KH-like domain at the C-terminus... - 133.325 1.56E-37 437 - 519 superfamily 258851
PRK00093 GTP-binding protein Der; Reviewed - 611.284 0 70 - 525 multi-dom 234628

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
32414 Not available 196010 254453 311691 Cre16.g658450.t1.2 AT3G12080.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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