PHATRDRAFT_17276 skp1 family (SKP1)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_17276 chr_1 skp1 family (SKP1) 426162 426875 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0032

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Skp1 superfamily Skp1 family, dimerization domain; Skp1 family, dimerization domain. - 127.283 3.73E-38 93 - 168 superfamily 250639
Skp1 superfamily Skp1 family, dimerization domain; Skp1 family, dimerization domain. - 127.283 3.73E-38 93 - 168 superfamily 250639
Skp1 Found in Skp1 protein family; Family of Skp1 (kinetochore protein required for cell cycle... cl17737 97.364 3.03E-26 12 - 118 specific 214704
Skp1_POZ superfamily Skp1 family, tetramerization domain; Skp1 family, tetramerization domain. - 97.364 3.03E-26 12 - 118 superfamily 266799
SKP1 SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones] - 141.62 1.15E-42 8 - 168 multi-dom 227528

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
38460 Not available 212068 223396 434598 Cre12.g501200.t1.2 AT1G75950.1 354552

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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